Genome Property Definition Page
| Accession | GenProp0749 |
| Name | choline sulfate utilization |
| Type | SYSTEM |
| Description | This property describes a gene pair for choline sulfate utilization. Choline is a precursor to the osmoprotectant glycine-betaine and to acetylcholine, and can be used as an energy source. One member of the gene pair is a choline-sulfatase, as in Sinorhizobium meliloti and Pseudomonas aeruginosa PAO1. The other gene is both adjacent and a member of family TIGR03414, periplasmic binding proteins for the ABC transporters responsible for choline uptake. It appears that several different periplasmic binding protein interact with the same permease and ATP-binding subunit. |
| JCVI Role | Amino acids, peptides and amines |
| Parent Property | GenProp0142: catabolism GenProp0180: small molecule transport |
Components
| Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
|---|---|---|---|---|
| putative choline sulfate transcription factor | chol_TF | YES | TIGR03418 (HMM): putative choline sulfate-utilization transcription factor | |
| choline sulfate periplasmic binding protien | peripl | YES | TIGR03414 (HMM-CLUST): choline ABC transporter, periplasmic binding protein | |
| choline-sulfatase | sulfa | YES | TIGR03417 (HMM): choline-sulfatase |
Parent Properties
| Accession | Name |
|---|---|
| GenProp0142 | catabolism |
| GenProp0180 | small molecule transport |
Sibling Properties
| Accession | Name |
|---|---|
| GenProp0055 | polyhydroxyalkanoic acids |
| GenProp0141 | galactose-6-phosphate degradation via tagatose-6-phosphate |
| GenProp0156 | cyanophycin-like storage polymers |
| GenProp0168 | glycogen system |
| GenProp0210 | phenylacetic acid catabolism |
| GenProp0231 | 4-hydroxyphenylacetate degradation |
| GenProp0233 | GABA utilization |
| GenProp0238 | 2-aminoethylphosphonate catabolism to acetaldehyde |
| GenProp0239 | propionyl-CoA catabolism |
| GenProp0241 | phosphonate catabolism |
| GenProp0271 | trehalose utilization |
| GenProp0272 | pyruvate fermentation to acetoin |
| GenProp0273 | protocatechuate degradation to beta-ketoadipate |
| GenProp0283 | beta-ketoadipate degradation to succinyl-CoA and acetyl-CoA |
| GenProp0294 | ethanolamine degradation proteinaceous organelle |
| GenProp0457 | rhamnose catabolism |
| GenProp0458 | fucose catabolism |
| GenProp0461 | utilization of deoxynucleosides |
| GenProp0653 | ectoine catabolism |
| GenProp0674 | malonate decarboxylase |
| GenProp0686 | allantoin catabolism to glyoxalate and urea |
| GenProp0687 | allantoin catabolism to oxamate and carbamoyl-phosphate |
| GenProp0688 | urate catabolism to allantoin |
| GenProp0691 | glycolysis |
| GenProp0693 | fructose utilization as fructose-1,6-bisphosphate |
| GenProp0694 | glucose utilization as fructose-1,6-bisphosphate |
| GenProp0700 | purine catabolism via urate, xanthine and allantoin |
| GenProp0702 | benzoyl-CoA reductase |
| GenProp0703 | 4-hydroxybenzoyl-CoA reductase |
| GenProp0706 | cyclohexa-1,5-diene-1-carbonyl-CoA to 3-hydroxypimelyl-CoA, dch/had/oah pathway |
| GenProp0708 | catechol meta-cleavage pathway |
| GenProp0709 | benzoate catabolism BoxABC pathway |
| GenProp0711 | catechol ortho-cleavage upper pathway |
| GenProp0714 | galactarate utilization via tartronate semi-aldehyde |
| GenProp0715 | galactarate utilization via 2-oxoglutarate semialdehyde |
| GenProp0716 | glucarate utilization via tartronate semi-aldehyde |
| GenProp0717 | glucarate utilization via 2-oxoglutarate semialdehyde |
| GenProp0718 | oxalate degradation |
| GenProp0734 | amino acid catabolism |
| GenProp0760 | putrescine degradation to GABA via gamma-glutamylation |
| GenProp0763 | nicotinate fermentation to pyruvate and propionate |
| GenProp0810 | encapsulin proteinaceous organelle |
| GenProp0813 | pyrimidine utilization operon, RutABCDEFGR |
| GenProp0902 | quinohemoprotein amine dehydrogenase |
| GenProp1071 | myo-inositol catabolism |
| GenProp1072 | cyanase system |
| GenProp1076 | choline TMA-lyase system |
| GenProp0119 | PTS transport system |
| GenProp0129 | Na+-translocating NADH-quinone reductase |
| GenProp0135 | NADH dehydrogenase I |
| GenProp0172 | Potassium-transporting ATPase KdpFABC |
| GenProp0176 | TRAP-T (tripartite ATP-independent periplasmic transporters) family transporters |
| GenProp0190 | phosphate ABC transporter (pstSCAB-phoU) |
| GenProp0191 | sulfate/thiosulfate ABC transporter |
| GenProp0192 | molybdate ABC transporter |
| GenProp0236 | phosphonates ABC transport |
| GenProp0252 | thiamine/TPP ABC transporter ThiBPQ |
| GenProp0279 | cobalt import systems |
| GenProp0494 | nickel import ABC transporter |
| GenProp0542 | Tol-Pal system |
| GenProp0543 | TonB-dependent transport |
| GenProp0651 | ectoine ABC transporter EhuABCD |
| GenProp0712 | 2-aminoethylphosphonate (AEP) ABC transporter, type I, PhnSTUV |
| GenProp0721 | 2-aminoethylphosphonate (AEP) ABC transporter, type II |
| GenProp0743 | urea ABC transporter UrtABCDE |
| GenProp0748 | choline ABC transporter, ChoXWV family |
| GenProp0828 | heme uptake system, NEAT-domain mediated |
| GenProp0853 | lantibiotic system, gallidermin/epidermin family |
| GenProp0873 | ion-motive antiporter cycles |