Genome Property Definition Page
Accession | GenProp0691 |
Name | glycolysis |
Type | PATHWAY |
Description | Various monosaccharides can be converted into fructose-1,6-bisphosphate and subsequently broken down to three carbon units (i.e. pyruvate) via this pathway for utilization in basic metabolism. |
JCVI Role | Glycolysis/gluconeogenesis |
Parent Property | GenProp0070: energy metabolism GenProp0142: catabolism |
Gene Ontology Term | GO:0006096: glycolysis (biological_process) |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
phosphopyruvate hydratase | ENO | YES | TIGR01060 (HMM): phosphopyruvate hydratase | GO:0006096: glycolysis |
fructose-bisphosphate aldolase | FBA | YES | PF00274 (HMM): fructose-bisphosphate aldolase class-I TIGR01520 (HMM): fructose-bisphosphate aldolase, class II | GO:0006096: glycolysis GO:0006096: glycolysis |
glyceraldehyde-3-phosphate dehydrogenase | GAPDH | YES | TIGR01534 (HMM): glyceraldehyde-3-phosphate dehydrogenase, type I TIGR01546 (HMM): glyceraldehyde-3-phosphate dehydrogenase, type II | GO:0006096: glycolysis GO:0006096: glycolysis |
phosphoglycerate mutase | PGAM | YES | TIGR01307 (HMM): phosphoglycerate mutase (2,3-diphosphoglycerate-independent) TIGR00306 (HMM): phosphoglycerate mutase (2,3-diphosphoglycerate-independent), archaeal form TIGR01258 (HMM): phosphoglycerate mutase 1 family | GO:0006096: glycolysis GO:0006096: glycolysis GO:0006096: glycolysis |
phosphoglycerate kinase | PGK | YES | PF00162 (HMM): phosphoglycerate kinase | GO:0006096: glycolysis |
pyruvate kinase | PK | YES | TIGR01064 (HMM): pyruvate kinase | GO:0006096: glycolysis |
triosephosphate isomerase | TIM | YES | TIGR00419 (HMM): triose-phosphate isomerase PF00121 (HMM): triosephosphate isomerase | GO:0006096: glycolysis GO:0006096: glycolysis |
source(s) of fructose-1,6-bisphosphate | fbp-in | YES | GenProp0693 (GENPROP): fructose utilization as fructose-1,6-bisphosphate GenProp0694 (GENPROP): glucose utilization as fructose-1,6-bisphosphate | GO:0006096: glycolysis GO:0006096: glycolysis |
Parent Properties
Accession | Name |
---|---|
GenProp0070 | energy metabolism |
GenProp0142 | catabolism |
Sibling Properties
Accession | Name |
---|---|
GenProp0011 | methanogenesis |
GenProp0023 | glyoxylate shunt |
GenProp0027 | photosynthesis |
GenProp0033 | TCA cycle |
GenProp0120 | pentose phosphate cycle |
GenProp0131 | electron transport |
GenProp0243 | ATP synthases |
GenProp0298 | fermentation |
GenProp0459 | D-xylose utilization (conversion to D-xylulose-5-phosphate) |
GenProp0468 | Entner-Doudoroff pathway |
GenProp0473 | arsenite oxidase |
GenProp0611 | aerobic respiration |
GenProp0636 | respiratory nitrate reductase |
GenProp0637 | anaerobic dimethyl sulfoxide reductase |
GenProp0638 | trimethylamine N-oxide reductase system |
GenProp0682 | formate-dependent nitrite reductase, seven-gene type |
GenProp0683 | cytochrome c nitrite reductase NrfHA |
GenProp0695 | cytochrome b558/566 |
GenProp0723 | hydrogenase, nickel and F420-dependent |
GenProp0737 | anaerobic glycerol-3-phosphate dehydrogenase complex |
GenProp0755 | pyruvate conversion to propionate, anaerobic, FAD/NAD-regenerating |
GenProp0756 | fumarate reductase complex |
GenProp0764 | DMSO reductase family type II enzyme |
GenProp0841 | 2-oxoacid:ferredoxin oxidoreductase |
GenProp0856 | bacterio-opsin system |
GenProp0914 | hydrogenase, [FeFe]-dependent |
GenProp0915 | hydrogenase, mono-iron type |
GenProp1089 | B12-dependent trimeric diol/glycerol dehydratase |
GenProp1101 | quinoprotein cytochrome relay system |
GenProp0055 | polyhydroxyalkanoic acids |
GenProp0141 | galactose-6-phosphate degradation via tagatose-6-phosphate |
GenProp0156 | cyanophycin-like storage polymers |
GenProp0168 | glycogen system |
GenProp0210 | phenylacetic acid catabolism |
GenProp0231 | 4-hydroxyphenylacetate degradation |
GenProp0233 | GABA utilization |
GenProp0238 | 2-aminoethylphosphonate catabolism to acetaldehyde |
GenProp0239 | propionyl-CoA catabolism |
GenProp0241 | phosphonate catabolism |
GenProp0271 | trehalose utilization |
GenProp0272 | pyruvate fermentation to acetoin |
GenProp0273 | protocatechuate degradation to beta-ketoadipate |
GenProp0283 | beta-ketoadipate degradation to succinyl-CoA and acetyl-CoA |
GenProp0294 | ethanolamine degradation proteinaceous organelle |
GenProp0457 | rhamnose catabolism |
GenProp0458 | fucose catabolism |
GenProp0461 | utilization of deoxynucleosides |
GenProp0653 | ectoine catabolism |
GenProp0674 | malonate decarboxylase |
GenProp0686 | allantoin catabolism to glyoxalate and urea |
GenProp0687 | allantoin catabolism to oxamate and carbamoyl-phosphate |
GenProp0688 | urate catabolism to allantoin |
GenProp0693 | fructose utilization as fructose-1,6-bisphosphate |
GenProp0694 | glucose utilization as fructose-1,6-bisphosphate |
GenProp0700 | purine catabolism via urate, xanthine and allantoin |
GenProp0702 | benzoyl-CoA reductase |
GenProp0703 | 4-hydroxybenzoyl-CoA reductase |
GenProp0706 | cyclohexa-1,5-diene-1-carbonyl-CoA to 3-hydroxypimelyl-CoA, dch/had/oah pathway |
GenProp0708 | catechol meta-cleavage pathway |
GenProp0709 | benzoate catabolism BoxABC pathway |
GenProp0711 | catechol ortho-cleavage upper pathway |
GenProp0714 | galactarate utilization via tartronate semi-aldehyde |
GenProp0715 | galactarate utilization via 2-oxoglutarate semialdehyde |
GenProp0716 | glucarate utilization via tartronate semi-aldehyde |
GenProp0717 | glucarate utilization via 2-oxoglutarate semialdehyde |
GenProp0718 | oxalate degradation |
GenProp0734 | amino acid catabolism |
GenProp0749 | choline sulfate utilization |
GenProp0760 | putrescine degradation to GABA via gamma-glutamylation |
GenProp0763 | nicotinate fermentation to pyruvate and propionate |
GenProp0810 | encapsulin proteinaceous organelle |
GenProp0813 | pyrimidine utilization operon, RutABCDEFGR |
GenProp0902 | quinohemoprotein amine dehydrogenase |
GenProp1071 | myo-inositol catabolism |
GenProp1072 | cyanase system |
GenProp1076 | choline TMA-lyase system |