Genome Property Definition Page
| Accession | GenProp0687 | |
| Name | allantoin catabolism to oxamate and carbamoyl-phosphate | |
| Type | PATHWAY | |
| Description | Allantoin ([(4S)-2,5-dioxoimidazolidin-4-yl]urea) is a breakdown product of urate and may be obtained by an endogenous urate catabolism pathway or by transport from the environment. This catabolism pathway avoids the production of urea (as in the pathway to glyoxalate -- GenProp0686) and instead produces ammonia by the action of allantoate amidohydrolase (3.5.3.9) and the breakdown of carbamoyl-phosphate by carbamate kinase (2.7.2.2). A by-product of this pathway is oxamate (oxalic monoamide) which is presumably excreted. | |
| JCVI Role | Other | |
| Parent Property | GenProp0142: catabolism | |
| Literature References |
|
Components
| Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
|---|---|---|---|---|
| carbamate kinase (2.7.2.2) | CK | YES | TIGR00746 (HMM): carbamate kinase | |
| source of allantoin | all-in | NO | TIGR00800 (HMM-CLUST): NCS1 nucleoside transporter familyGenProp0688 (GENPROP): urate catabolism to allantoin | |
| allantoinase (3.5.2.5) | allB | YES | TIGR03178 (HMM): allantoinase | |
| allantoate amidohydrolase (3.5.3.9) | allC | YES | TIGR01879 (HMM-CLUST): amidase, hydantoinase/carbamoylase family TIGR03176 (HMM): allantoate amidohydrolase TIGR02961 (HMM): allantoicase | |
| ureidoglycolate dehydrogenase (1.1.1.54) | allD | YES | TIGR03175 (HMM): ureidoglycolate dehydrogenase | |
| cupin domain protein, unknown function | allX | NO | TIGR03214 (HMM): putative allantoin catabolism protein | |
| oxamate carbamoyltransferase (2.1.3.5) | oxaCT | NO |
Parent Properties
| Accession | Name |
|---|---|
| GenProp0142 | catabolism |
Sibling Properties
| Accession | Name |
|---|---|
| GenProp0055 | polyhydroxyalkanoic acids |
| GenProp0141 | galactose-6-phosphate degradation via tagatose-6-phosphate |
| GenProp0156 | cyanophycin-like storage polymers |
| GenProp0168 | glycogen system |
| GenProp0210 | phenylacetic acid catabolism |
| GenProp0231 | 4-hydroxyphenylacetate degradation |
| GenProp0233 | GABA utilization |
| GenProp0238 | 2-aminoethylphosphonate catabolism to acetaldehyde |
| GenProp0239 | propionyl-CoA catabolism |
| GenProp0241 | phosphonate catabolism |
| GenProp0271 | trehalose utilization |
| GenProp0272 | pyruvate fermentation to acetoin |
| GenProp0273 | protocatechuate degradation to beta-ketoadipate |
| GenProp0283 | beta-ketoadipate degradation to succinyl-CoA and acetyl-CoA |
| GenProp0294 | ethanolamine degradation proteinaceous organelle |
| GenProp0457 | rhamnose catabolism |
| GenProp0458 | fucose catabolism |
| GenProp0461 | utilization of deoxynucleosides |
| GenProp0653 | ectoine catabolism |
| GenProp0674 | malonate decarboxylase |
| GenProp0686 | allantoin catabolism to glyoxalate and urea |
| GenProp0688 | urate catabolism to allantoin |
| GenProp0691 | glycolysis |
| GenProp0693 | fructose utilization as fructose-1,6-bisphosphate |
| GenProp0694 | glucose utilization as fructose-1,6-bisphosphate |
| GenProp0700 | purine catabolism via urate, xanthine and allantoin |
| GenProp0702 | benzoyl-CoA reductase |
| GenProp0703 | 4-hydroxybenzoyl-CoA reductase |
| GenProp0706 | cyclohexa-1,5-diene-1-carbonyl-CoA to 3-hydroxypimelyl-CoA, dch/had/oah pathway |
| GenProp0708 | catechol meta-cleavage pathway |
| GenProp0709 | benzoate catabolism BoxABC pathway |
| GenProp0711 | catechol ortho-cleavage upper pathway |
| GenProp0714 | galactarate utilization via tartronate semi-aldehyde |
| GenProp0715 | galactarate utilization via 2-oxoglutarate semialdehyde |
| GenProp0716 | glucarate utilization via tartronate semi-aldehyde |
| GenProp0717 | glucarate utilization via 2-oxoglutarate semialdehyde |
| GenProp0718 | oxalate degradation |
| GenProp0734 | amino acid catabolism |
| GenProp0749 | choline sulfate utilization |
| GenProp0760 | putrescine degradation to GABA via gamma-glutamylation |
| GenProp0763 | nicotinate fermentation to pyruvate and propionate |
| GenProp0810 | encapsulin proteinaceous organelle |
| GenProp0813 | pyrimidine utilization operon, RutABCDEFGR |
| GenProp0902 | quinohemoprotein amine dehydrogenase |
| GenProp1071 | myo-inositol catabolism |
| GenProp1072 | cyanase system |
| GenProp1076 | choline TMA-lyase system |