Genome Property Definition Page

Namecholine ABC transporter, ChoXWV family
DescriptionThis Genome Property describes a family of quaternary amine transporters that appears, based on physical characterization in Sinorhizobium meliloti and on bioinformatic methods to import choline. The presence of paralogs in some bacteria and their association with choline sulfatase genes suggests choline sulfate may also be a substrate.
JCVI RoleAmino acids, peptides and amines
Parent PropertyGenProp0180: small molecule transport

Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
choline ABC transporter, ATP-binding proteincho_ATPYESTIGR03415 (HMM): choline ABC transporter, ATP-binding protein
choline ABC transporter, periplasmic binding proteincho_binYESTIGR03414 (HMM-CLUST): choline ABC transporter, periplasmic binding protein
choline ABC transporter, permease proteincho_prmYESTIGR03416 (HMM): choline ABC transporter, permease protein

Parent Properties
GenProp0180small molecule transport

Sibling Properties
GenProp0119PTS transport system
GenProp0129Na+-translocating NADH-quinone reductase
GenProp0135NADH dehydrogenase I
GenProp0172Potassium-transporting ATPase KdpFABC
GenProp0176TRAP-T (tripartite ATP-independent periplasmic transporters) family transporters
GenProp0190phosphate ABC transporter (pstSCAB-phoU)
GenProp0191sulfate/thiosulfate ABC transporter
GenProp0192molybdate ABC transporter
GenProp0236phosphonates ABC transport
GenProp0252thiamine/TPP ABC transporter ThiBPQ
GenProp0279cobalt import systems
GenProp0494nickel import ABC transporter
GenProp0542Tol-Pal system
GenProp0543TonB-dependent transport
GenProp0651ectoine ABC transporter EhuABCD
GenProp0693fructose utilization as fructose-1,6-bisphosphate
GenProp0694glucose utilization as fructose-1,6-bisphosphate
GenProp07122-aminoethylphosphonate (AEP) ABC transporter, type I, PhnSTUV
GenProp07212-aminoethylphosphonate (AEP) ABC transporter, type II
GenProp0743urea ABC transporter UrtABCDE
GenProp0749choline sulfate utilization
GenProp0828heme uptake system, NEAT-domain mediated
GenProp0853lantibiotic system, gallidermin/epidermin family
GenProp0873ion-motive antiporter cycles