Genome Property Definition Page
Accession | GenProp0748 |
Name | choline ABC transporter, ChoXWV family |
Type | SYSTEM |
Description | This Genome Property describes a family of quaternary amine transporters that appears, based on physical characterization in Sinorhizobium meliloti and on bioinformatic methods to import choline. The presence of paralogs in some bacteria and their association with choline sulfatase genes suggests choline sulfate may also be a substrate. |
JCVI Role | Amino acids, peptides and amines |
Parent Property | GenProp0180: small molecule transport |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
choline ABC transporter, ATP-binding protein | cho_ATP | YES | TIGR03415 (HMM): choline ABC transporter, ATP-binding protein | |
choline ABC transporter, periplasmic binding protein | cho_bin | YES | TIGR03414 (HMM-CLUST): choline ABC transporter, periplasmic binding protein | |
choline ABC transporter, permease protein | cho_prm | YES | TIGR03416 (HMM): choline ABC transporter, permease protein |
Parent Properties
Accession | Name |
---|---|
GenProp0180 | small molecule transport |
Sibling Properties
Accession | Name |
---|---|
GenProp0119 | PTS transport system |
GenProp0129 | Na+-translocating NADH-quinone reductase |
GenProp0135 | NADH dehydrogenase I |
GenProp0172 | Potassium-transporting ATPase KdpFABC |
GenProp0176 | TRAP-T (tripartite ATP-independent periplasmic transporters) family transporters |
GenProp0190 | phosphate ABC transporter (pstSCAB-phoU) |
GenProp0191 | sulfate/thiosulfate ABC transporter |
GenProp0192 | molybdate ABC transporter |
GenProp0236 | phosphonates ABC transport |
GenProp0252 | thiamine/TPP ABC transporter ThiBPQ |
GenProp0279 | cobalt import systems |
GenProp0494 | nickel import ABC transporter |
GenProp0542 | Tol-Pal system |
GenProp0543 | TonB-dependent transport |
GenProp0651 | ectoine ABC transporter EhuABCD |
GenProp0693 | fructose utilization as fructose-1,6-bisphosphate |
GenProp0694 | glucose utilization as fructose-1,6-bisphosphate |
GenProp0712 | 2-aminoethylphosphonate (AEP) ABC transporter, type I, PhnSTUV |
GenProp0721 | 2-aminoethylphosphonate (AEP) ABC transporter, type II |
GenProp0743 | urea ABC transporter UrtABCDE |
GenProp0749 | choline sulfate utilization |
GenProp0828 | heme uptake system, NEAT-domain mediated |
GenProp0853 | lantibiotic system, gallidermin/epidermin family |
GenProp0873 | ion-motive antiporter cycles |