Genome Property Definition Page
Accession | GenProp0941 |
Name | TonB-dependent nutrient uptake pairs, RagAB/SusCD type |
Type | SYSTEM |
Description | A set of gene pairs almost entirely restricted to the Bacteroidetes, and with up to 100 pairs per genome, consists of TonB-linked outer membrane protein related to RagA and SusC, and its neighbor related to RagB and SusD. |
JCVI Role | cofactor |
Parent Property | GenProp0071: transport |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
TonB-linked outer membrane protein, SusC/RagA family | RagA | YES | TIGR04056 (HMM): TonB-linked outer membrane protein, SusC/RagA family | |
outer membrane protein, SusD/RagB family | RagB | YES | PF07980 (HMM-CLUST): SusD family PF14322 (HMM-CLUST): starch-binding protein, SusD-like family |
Parent Properties
Accession | Name |
---|---|
GenProp0071 | transport |
Sibling Properties
Accession | Name |
---|---|
GenProp0179 | protein transport |
GenProp0180 | small molecule transport |
GenProp0489 | F-type conjugation system |
GenProp0649 | heterocyst-related ABC exporter DevBCA |
GenProp0821 | putative Na:solute symporter two-gene cassette |
GenProp0857 | anchored repeat-class ABC transporter, P. acnes type |
GenProp0895 | alcohol ABC transporter, PedABC-type |
GenProp1094 | energy-coupling factor transporters |