Genome Property Definition Page

NameTonB-dependent nutrient uptake pairs, RagAB/SusCD type
DescriptionA set of gene pairs almost entirely restricted to the Bacteroidetes, and with up to 100 pairs per genome, consists of TonB-linked outer membrane protein related to RagA and SusC, and its neighbor related to RagB and SusD.
JCVI Rolecofactor
Parent PropertyGenProp0071: transport

Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
TonB-linked outer membrane protein, SusC/RagA familyRagAYESTIGR04056 (HMM): TonB-linked outer membrane protein, SusC/RagA family
outer membrane protein, SusD/RagB familyRagBYESPF07980 (HMM-CLUST): SusD family
PF14322 (HMM-CLUST): starch-binding protein, SusD-like family

Parent Properties

Sibling Properties
GenProp0179protein transport
GenProp0180small molecule transport
GenProp0489F-type conjugation system
GenProp0649heterocyst-related ABC exporter DevBCA
GenProp0821putative Na:solute symporter two-gene cassette
GenProp0857anchored repeat-class ABC transporter, P. acnes type
GenProp0895alcohol ABC transporter, PedABC-type
GenProp1094energy-coupling factor transporters