Genome Property Definition Page

NameCRISPR system, Myxan subtype
DescriptionThis Genome Property describes a subtype of CRISPR/Cas system as found in Myxococcus xanthus near locus MXAN_7263, in Leptospira interrogans, in Anabaena variabilis ATCC 29413, Lyngbya sp. PCC 8106, Cyanothece, etc. Repeats average about 36 base pairs in length. A typical repeat is GTGCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC. Interestingly, this system includes the DevR and DevS proteins of Myxococcus, which have been recruited to demonstrable roles in fruiting body development.
Parent PropertyGenProp0021: CRISPR region

Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
CRISPR-associated protein Cas1, MYXAN subtypecas1cmxYESTIGR03983 (HMM): CRISPR-associated endonuclease Cas1, subtype MYXAN
CRISPR-associated protein Cas2, MYXAN subtypecas2cmxYESTIGR01573 (HMM-CLUST): CRISPR-associated endonuclease Cas2
Cas3, MYXAN regioncas3cmxYESTIGR01587 (HMM-CLUST): CRISPR-associated helicase Cas3
CRISPR-associated protein Cas4, MYXAN subtypecas4cmxYESTIGR00372 (HMM-CLUST): CRISPR-associated protein Cas4
CRISPR-associated protein Csx13, C-terminal regioncmx1CYESTIGR03486 (HMM): CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype, C-terminal region
CRISPR-associated protein Csx13, N-terminal regioncmx1NYESTIGR03485 (HMM): CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype
CRISPR-associated protein DevScmx5YESTIGR02586 (HMM): CRISPR-associated protein Cas5/DevS, subtype MYXAN
CRISPR-associated protein Cas6, MYXAN subtypecmx6YESTIGR02807 (HMM): CRISPR-associated protein Cas6, subtype MYXAN
CRISPR-associated autoregulator, MYXAN subtypecmxREGYESTIGR01875 (HMM-CLUST): CRISPR-associated autoregulator DevR family

Parent Properties
GenProp0021CRISPR region

Sibling Properties
GenProp0310CRISPR system, I-F/Ypest subtype
GenProp0313CRISPR system, I-C/Dvulg subtype
GenProp0314CRISPR system, II/Nmeni subtype
GenProp0315CRISPR system, I-E/Ecoli subtype
GenProp0316CRISPR system, III-B/RAMP module subtype
GenProp0317CRISPR system, I-B subtype, Tneap branch
GenProp0318CRISPR system, III-A/Mtube subtype
GenProp0319CRISPR system, I-A/Apern subtype
GenProp0320CRISPR system, I-B subtype, Hmari branch
GenProp0469CRISPR system, Dpsyc subtype
GenProp0670CRISPR system, Aferr subtype
GenProp0685CRISPR system, I-D/Cyano subtype
GenProp0768CRISPR system, Pging subtype
GenProp1061CRISPR system, PreFran subtype