Genome Property Definition Page

NameCRISPR system, I-D/Cyano subtype
DescriptionThis property describes a set of CRISPR-Associated Sequence (Cas) proteins found in at least three Cyanobacteria, as well as in a diverse set of Archaea. Associated repeats are typically 35-37 nucleotides long.
Parent PropertyGenProp0021: CRISPR region

Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
CRISPR-associated protein Cas1, Cyano-typeCas1YESTIGR00287 (HMM-CLUST): CRISPR-associated endonuclease Cas1
TIGR04093 (HMM): CRISPR-associated endonuclease Cas1, subtype CYANO
CRISPR-associated helicase, Cyano-typeCy_cas3YESTIGR03158 (HMM): CRISPR-associated helicase Cas3, subtype CYANO
CRISPR-associated protein Csc1Cyano1YESTIGR03159 (HMM): CRISPR type I-D/CYANO-associated protein Csc1
CRISPR-associated protein Csc2Cyano2YESTIGR03157 (HMM): CRISPR type I-D/CYANO-associated protein Csc2
CRISPR-associated protein Csc3Cyano3NOTIGR03174 (HMM): CRISPR type I-D/CYANO-associated protein Csc3/Cas10d

Parent Properties
GenProp0021CRISPR region

Sibling Properties
GenProp0310CRISPR system, I-F/Ypest subtype
GenProp0313CRISPR system, I-C/Dvulg subtype
GenProp0314CRISPR system, II/Nmeni subtype
GenProp0315CRISPR system, I-E/Ecoli subtype
GenProp0316CRISPR system, III-B/RAMP module subtype
GenProp0317CRISPR system, I-B subtype, Tneap branch
GenProp0318CRISPR system, III-A/Mtube subtype
GenProp0319CRISPR system, I-A/Apern subtype
GenProp0320CRISPR system, I-B subtype, Hmari branch
GenProp0469CRISPR system, Dpsyc subtype
GenProp0670CRISPR system, Aferr subtype
GenProp0768CRISPR system, Pging subtype
GenProp0922CRISPR system, Myxan subtype
GenProp1061CRISPR system, PreFran subtype