Accession | GenProp0858 |
Name | conjugative transposon, Bacteroides type |
Type | SYSTEM |
Description | This property describes a class of conjugative transposon, including CTnDOT and related elements, from various Bacteroides and related species. These self-transmissable elements can be fairly large, 50-100 Kb, and contain proteins required for integration, excision, and conjugation. A single genome, such as Bacteroides thetaiotaomicron VPI-5482, may contain several such elements. |
JCVI Role | Transposon functions |
Parent Property | GenProp0076: DNA handling
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Literature References | [ 1 ] Cheng Q, Paszkiet BJ, Shoemaker NB, Gardner JF, Salyers AA Integration and excision of a Bacteroides conjugative transposon, CTnDOT. J Bacteriol. 2000 Jul;182(14):4035-43. PMID 10869083 |
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Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
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Bacteroides conjugative transposon TraG protein | CnjTr_G | YES | TIGR03783 (HMM): Bacteroides conjugation system ATPase, TraG family | |
Bacteroides conjugative transposon TraJ protein | CnjTr_J | YES | TIGR03782 (HMM): Bacteroides conjugative transposon TraJ protein | |
Bacteroides conjugative transposon TraK protein | CnjTr_K | YES | TIGR03781 (HMM): Bacteroides conjugative transposon TraK protein | |
Bacteroides conjugative transposon TraM protein | CnjTr_M | YES | TIGR03779 (HMM): Bacteroides conjugative transposon TraM protein | |
Bacteroides conjugative transposon TraN protein | CnjTr_N | YES | TIGR03780 (HMM): Bacteroides conjugative transposon TraN protein | |