Genome Property Definition Page
| Accession | GenProp1086 |
| Name | Firmicutes/Treponema mobile radical SAM system |
| Type | SYSTEM |
| Description | This Genome Property is a cassette of two tandem radical SAM enzymes of unknown function, usually accompanied by a MarR family transcriptional regulator. Species with the system include both members of the genus Treponema from the human oral microbiome and from the phylum Firmicutes (class Clostridia) from gut microbiome. Sequence identity for enzymes spanning this taxonomic divide can exceed 95 percent, certain to indicate lateral gene transfer. |
| Parent Property | GenProp0475: Unknown biological process |
Components
| Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
|---|---|---|---|---|
| mobile rSAM pair MarR family regulator | FT_MarR | YES | TIGR04472 (HMM): mobile rSAM pair MarR family regulator | |
| radical SAM mobile pair protein A | FTsam1 | YES | TIGR04471 (HMM): radical SAM mobile pair protein A | |
| radical SAM mobile pair protein B | FTsam2 | YES | TIGR04470 (HMM): radical SAM mobile pair protein B |
Parent Properties
| Accession | Name |
|---|---|
| GenProp0475 | Unknown biological process |
Sibling Properties
| Accession | Name |
|---|---|
| GenProp0470 | sporadically distributed four-gene operon |
| GenProp0471 | uncharacterized gene pair TIGR02683/TIGR02684 |
| GenProp0472 | uncharacterized gene pair TIGR02687/TIGR02688 |
| GenProp0627 | gene pair involved in iron and oxygen metabolism |
| GenProp0665 | peptide chain release operon, RctB-like/PrfH |
| GenProp0751 | Acidobacterial ADOP/PadR gene pairs |
| GenProp0790 | sporadic pair TIGR03545/TIGR03546 |
| GenProp0798 | Enterococcus/Aeromonas extended locus |
| GenProp0830 | integral membrane mystery pair |
| GenProp0854 | ParB-rel/ThiF-rel cassette PRTRC |
| GenProp0868 | uncharacterized protein pair with twin-arg and repeat |
| GenProp0894 | Actinobacterial uncharacterized trio |
| GenProp0916 | radical SAM/uncharacterized protein TIGR03936 system |
| GenProp0940 | metallo-mystery pair |
| GenProp0959 | radical SAM/uncharacterized protein TIGR04002 system |
| GenProp0965 | YedE/YedF selenium handling system |
| GenProp1063 | Memo/AMMECR1/rSAM family trio system |
| GenProp1066 | uncharacterized cassette GAK (Grasp, Amphipathic, Kinase) |