Genome Property Definition Page
Accession | GenProp1082 | |
Name | 16S rRNA C1402 m(4)Cm modification | |
Type | SYSTEM | |
Description | RsmH (previously MraW) and RsmI (previously YraL) together make a dimethyl modification to an invariant cytidine nucleotide found in the 16S rRNA of all bacteria (site in C1402 in E. coli). | |
JCVI Role | tRNA and rRNA base modification | |
Parent Property | GenProp0819: RNA metabolism | |
Literature References |
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Gene Ontology Term | GO:0000154: rRNA modification (biological_process) |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
16S rRNA (cytosine(1402)-N(4))-methyltransferase | RsmH | YES | TIGR00006 (HMM): 16S rRNA (cytosine(1402)-N(4))-methyltransferase | GO:0000154: rRNA modification |
16S rRNA (cytidine(1402)-2'-O)-methyltransferase | RsmI | YES | TIGR00096 (HMM): 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | GO:0000154: rRNA modification |
Parent Properties
Accession | Name |
---|---|
GenProp0819 | RNA metabolism |
Sibling Properties
Accession | Name |
---|---|
GenProp0258 | tRNA aminoacylation |
GenProp0262 | RNA polymerase, bacterial |
GenProp0482 | 6S RNA (eubacterial RNA polymerase regulator) |
GenProp0677 | queuosine (Q-tRNA) biosynthesis from preQ0 |
GenProp0692 | selenouridine-containing tRNA |
GenProp0704 | tRNA U34 carboxymethylaminomethyl modification |
GenProp0898 | RNA ligase/unknown protein pair |
GenProp0948 | RNA repair, Hen1/Pnkp system |
GenProp1060 | tRNA N6-threonylcarbamoyladenosine modification |
GenProp1077 | tRNA(Pro) cmo5UGG modification |