Genome Property Definition Page
Accession | GenProp1060 | |
Name | tRNA N6-threonylcarbamoyladenosine modification | |
Type | SYSTEM | |
Description | E. coli genes ygjD, yeaZ, yrdC (rimN) and yjeE encode proteins involved in a universal tRNA modification, N6-threonylcarbamoyladenosine. | |
JCVI Role | tRNA and rRNA base modification | |
Parent Property | GenProp0819: RNA metabolism | |
Literature References |
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Gene Ontology Term | GO:0006400: tRNA modification (biological_process) |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
YeaZ protein | N6_YeaZ | YES | TIGR03725 (HMM): tRNA threonylcarbamoyl adenosine modification protein YeaZ | GO:0006400: tRNA modification |
YgjD protein | N6_YgjD | YES | TIGR03723 (HMM): tRNA threonylcarbamoyl adenosine modification protein TsaD | GO:0006400: tRNA modification |
YjeE protein | N6_YjeE | YES | TIGR00150 (HMM): tRNA threonylcarbamoyl adenosine modification protein YjeE | GO:0006400: tRNA modification |
YrdC protein | N6_YrdC | YES | TIGR00057 (HMM): tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family | GO:0006400: tRNA modification |
Parent Properties
Accession | Name |
---|---|
GenProp0819 | RNA metabolism |
Sibling Properties
Accession | Name |
---|---|
GenProp0258 | tRNA aminoacylation |
GenProp0262 | RNA polymerase, bacterial |
GenProp0482 | 6S RNA (eubacterial RNA polymerase regulator) |
GenProp0677 | queuosine (Q-tRNA) biosynthesis from preQ0 |
GenProp0692 | selenouridine-containing tRNA |
GenProp0704 | tRNA U34 carboxymethylaminomethyl modification |
GenProp0898 | RNA ligase/unknown protein pair |
GenProp0948 | RNA repair, Hen1/Pnkp system |
GenProp1077 | tRNA(Pro) cmo5UGG modification |
GenProp1082 | 16S rRNA C1402 m(4)Cm modification |