Genome Property Definition Page
Accession | GenProp1056 |
Name | rhizo-twelve system |
Type | SYSTEM |
Description | This Genome Property describes an uncharacterized oligosaccharide biosynthesis system, containing twelve or thirteen conserved sugar epimerases, glycosyltransferases, and uncharacterized enzymes. This system is common in plant-associated and soil bacteria, including multiple species of Bradyrhizobium, Mesorhizobium, and Methylobacterium. The designation rhizo-twelve reflects the species distribution favoring rhizobial bacteria and the size of the cassette. Note that this Genome Property should be regarded as still under construction until the number of components defined reaches twelve. |
Parent Property | GenProp0063: biosynthesis |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
methyltransferase, Rta_06860 family | RhTw01 | YES | TIGR04290 (HMM): methyltransferase, Rta_06860 family | |
B12-binding domain/radical SAM domain protein | RhTw02 | NO | TIGR04295 (HMM): B12-binding domain/radical SAM domain protein, rhizo-twelve system |
Parent Properties
Accession | Name |
---|---|
GenProp0063 | biosynthesis |
Sibling Properties
Accession | Name |
---|---|
GenProp0077 | natural products biosynthesis |
GenProp0126 | amino acid biosynthesis |
GenProp0184 | cofactor biosynthesis |
GenProp0185 | nucleotide biosynthesis |
GenProp0186 | storage and structural polymer biosynthesis |
GenProp0197 | protein biosynthesis |
GenProp0219 | spermidine biosynthesis from arginine (via agmatine) |
GenProp0267 | osmolyte biosynthesis |
GenProp0641 | spermidine biosynthesis from putrescine and S-adenosylmethionine |
GenProp0642 | putrescine biosynthesis from arginine utilizing agmatinase |
GenProp0643 | putrescine biosynthesis from arginine via ornithine |
GenProp0644 | putrescine biosynthesis from glutamate via ornithine |
GenProp0645 | putrescine biosynthesis |
GenProp0724 | phosphonoacetaldehyde biosynthesis from phosphoenolpyruvate |
GenProp0738 | agmatine to putrescine via N-carbamoylputrescine |
GenProp0795 | carbohydrate biosynthesis |
GenProp0838 | lipid biosynthesis |
GenProp0909 | capreomycidine biosynthesis |
GenProp0942 | alkane biosynthesis, cyanobacterial |
GenProp1053 | rSAM/selenodomain system |
GenProp1057 | radical SAM/SPASM system GeoRSP |