Genome Property Definition Page

Accession

GenProp0959

Name

radical SAM/uncharacterized protein TIGR04002 system

Type

SYSTEM

Description

The partner protein belongs to a family in which characterized members are the substrate specificity-conferring (often interchangeable) module of energy coupling factor (ECF)-type transporters. Two ATP-binding cassette proteins and the T component (see PF02361) provide the rest of the transport system. The radical SAM protein is uncharacterized but is likely to modify what the ECF system imports.

Parent Property

GenProp0475: Unknown biological process

Literature References

[ 1 ]Rodionov DA, Hebbeln P, Eudes A, ter Beek J, Rodionova IA, Erkens GB, Slotboom DJ, Gelfand MS, Osterman AL, Hanson AD, Eitinger T A novel class of modular transporters for vitamins in prokaryotes. J Bacteriol. 2009 Jan;191(1):42-51. doi: 10.1128/JB.01208-08. PMID 18931129

Components

Step Name	Step Num	Required	Evidence (Method)	Evidence Go Terms
ECF transport S component	partner	YES	TIGR04002 (HMM): TIGR04002 family protein
uncharacterized radical SAM protein	rSAM	YES	TIGR04100 (HMM): radical SAM enzyme, TIGR04100 family

Parent Properties

Accession	Name
GenProp0475	Unknown biological process

Sibling Properties

Accession	Name
GenProp0470	sporadically distributed four-gene operon
GenProp0471	uncharacterized gene pair TIGR02683/TIGR02684
GenProp0472	uncharacterized gene pair TIGR02687/TIGR02688
GenProp0627	gene pair involved in iron and oxygen metabolism
GenProp0665	peptide chain release operon, RctB-like/PrfH
GenProp0751	Acidobacterial ADOP/PadR gene pairs
GenProp0790	sporadic pair TIGR03545/TIGR03546
GenProp0798	Enterococcus/Aeromonas extended locus
GenProp0830	integral membrane mystery pair
GenProp0854	ParB-rel/ThiF-rel cassette PRTRC
GenProp0868	uncharacterized protein pair with twin-arg and repeat
GenProp0894	Actinobacterial uncharacterized trio
GenProp0916	radical SAM/uncharacterized protein TIGR03936 system
GenProp0940	metallo-mystery pair
GenProp0965	YedE/YedF selenium handling system
GenProp1063	Memo/AMMECR1/rSAM family trio system
GenProp1066	uncharacterized cassette GAK (Grasp, Amphipathic, Kinase)
GenProp1086	Firmicutes/Treponema mobile radical SAM system