Genome Property Definition Page
Accession | GenProp0805 |
Name | number of ambiguous nucleotide characters |
Type | CALCULATED |
Description | Ambiguous nucleotide calls are indicated in a sequence by non-ACTG characters. The number of these found in a sequence record is a measure of the sequence quality and degree of completion. |
Parent Property | GenProp0067: quantitative content |
Parent Properties
Accession | Name |
---|---|
GenProp0067 | quantitative content |
Sibling Properties
Accession | Name |
---|---|
GenProp0003 | count of DNA molecules |
GenProp0004 | count of predicted proteins |
GenProp0005 | count of tRNAs |
GenProp0020 | HMM hit percentage |
GenProp0085 | DNA GC content |
GenProp0086 | DNA size (megabases) |
GenProp0108 | amino acid abundance (order) |
GenProp0122 | protein average length |
GenProp0134 | functional gene clustering - property level |
GenProp0152 | DNA dinucleotide thermophily metric RR+YY-RY-YR |
GenProp0495 | sequenced plasmids |
GenProp0799 | bacterial core gene set, exactly 1 per genome |
GenProp0800 | bacterial core gene set, 1 or more per genome |
GenProp0815 | archaeal-only core gene set |
GenProp0831 | archaeal core gene set, exactly 1 per genome |
GenProp0832 | archaeal core gene set, 1 or more per genome |