Genome Property Definition Page

NameEnterococcus/Aeromonas extended locus
DescriptionThis Genome Property represents an uncharacterized, sporadically distributed eight-gene system. A somewhat broader set of bacteria contain three core genes from this system including a probable amidohydrolase (TIGR03583), a pyridoxal phosphate-dependent enzyme related to SelA (TIGR01437), and an uncharacterized protein (TIGR03581). Species with the eight-gene system include Aeromonas hydrophila ATCC7966, Salmonella typhimurium LT2, and Vibrio fischeri ES114 among the Proteobacteria, and Enterococcus faecalis V583 and Bacillus clausii KSM-K16 among the Firmicutes. The three-gene core is found also in Lactobacillus plantarum WCFS1, Bacillus anthracis, and Clostridium difficile QCD-32g58. Neighboring genes, including PTS-family transport genes and a member of the carbohydrate kinases, tend to suggest a role in carbohydrate catabolism.
Parent PropertyGenProp0475: Unknown biological process

Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
PRD domain protein EF_0829/AHA_3910EF_0829YESTIGR03582 (HMM): PRD domain protein, EF_0829/AHA_3910 family
conserved hypothetical protein EF_0830/AHA_3911EF_0830YESTIGR03577 (HMM): conserved hypothetical protein EF_0830/AHA_3911
conserved hypothetical protein EF_0831/AHA_3912EF_0831YESTIGR03578 (HMM): conserved hypothetical protein EF_0831/AHA_3912
conserved hypothetical protein EF_0832/AHA_3913EF_0832YESTIGR03580 (HMM): conserved hypothetical protein EF_0832/AHA_3913
conserved hypothetical protein EF_0833/AHA_3914EF_0833YESTIGR03579 (HMM): conserved hypothetical protein EF_0833/AHA_3914
probable amidohydrolase EF_0837/AHA_3915EF_0837YESTIGR03583 (HMM): putative amidohydrolase, EF_0837/AHA_3915 family
pyridoxal phosphate-dependent enzyme EF_0838/AHA_3916EF_0838YESTIGR01437 (HMM): uncharacterized pyridoxal phosphate-dependent enzyme
conserved hypothetical protein EF_0839/AHA_3917EF_0839YESTIGR03581 (HMM): conserved hypothetical protein EF_0839/AHA_3917

Parent Properties
GenProp0475Unknown biological process

Sibling Properties
GenProp0470sporadically distributed four-gene operon
GenProp0471uncharacterized gene pair TIGR02683/TIGR02684
GenProp0472uncharacterized gene pair TIGR02687/TIGR02688
GenProp0627gene pair involved in iron and oxygen metabolism
GenProp0665peptide chain release operon, RctB-like/PrfH
GenProp0751Acidobacterial ADOP/PadR gene pairs
GenProp0790sporadic pair TIGR03545/TIGR03546
GenProp0830integral membrane mystery pair
GenProp0854ParB-rel/ThiF-rel cassette PRTRC
GenProp0868uncharacterized protein pair with twin-arg and repeat
GenProp0894Actinobacterial uncharacterized trio
GenProp0916radical SAM/uncharacterized protein TIGR03936 system
GenProp0940metallo-mystery pair
GenProp0959radical SAM/uncharacterized protein TIGR04002 system
GenProp0965YedE/YedF selenium handling system
GenProp1063Memo/AMMECR1/rSAM family trio system
GenProp1066uncharacterized cassette GAK (Grasp, Amphipathic, Kinase)
GenProp1086Firmicutes/Treponema mobile radical SAM system