Genome Property Definition Page

NameShewanella-type decaheme system
DescriptionAn experimental property to look at protein systems that include the two types of deca-heme c-type cytochromes, modeled by TIGR03507 and TIGR03508.
JCVI RoleElectron transport
Literature References
[ 1 ] Ross DE, Ruebush SS, Brantley SL, Hartshorne RS, Clarke TA, Richardson DJ, Tien M   Characterization of protein-protein interactions involved in iron reduction by Shewanella oneidensis MR-1.   Appl Environ Microbiol. 2007 Sep;73(18):5797-808.  PMID 17675441

Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
large decaheme c-type cytochromeLG_decaYESTIGR03507 (HMM): decaheme c-type cytochrome, OmcA/MtrC family
outer membrane protein, MtrB/PioB familyOMPdecaYESTIGR03509 (HMM): decaheme-associated outer membrane protein, MtrB/PioB family
small decaheme c-type cytochromeSM_decaYESTIGR03508 (HMM): decaheme c-type cytochrome, DmsE family