Genome Property Definition Page
Accession | GenProp0627 | |
Name | gene pair involved in iron and oxygen metabolism | |
Type | SYSTEM | |
Description | The knockout of SO1377 in Shewanella oneidensis results in oxidative damage related to changes in iron metabolism [1]. The adjacent gene, SO1366 is phylogenomically linked and part of an apparent operon. | |
JCVI Role | Role category not yet assigned | |
Parent Property | GenProp0475: Unknown biological process GenProp0820: iron metabolism | |
Literature References |
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Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
SO1376 gene family | SO1376 | YES | ||
SO1377 gene family: part of COG2268 | SO1377 | YES |
Parent Properties
Accession | Name |
---|---|
GenProp0475 | Unknown biological process |
GenProp0820 | iron metabolism |
Sibling Properties
Accession | Name |
---|---|
GenProp0470 | sporadically distributed four-gene operon |
GenProp0471 | uncharacterized gene pair TIGR02683/TIGR02684 |
GenProp0472 | uncharacterized gene pair TIGR02687/TIGR02688 |
GenProp0665 | peptide chain release operon, RctB-like/PrfH |
GenProp0751 | Acidobacterial ADOP/PadR gene pairs |
GenProp0790 | sporadic pair TIGR03545/TIGR03546 |
GenProp0798 | Enterococcus/Aeromonas extended locus |
GenProp0830 | integral membrane mystery pair |
GenProp0854 | ParB-rel/ThiF-rel cassette PRTRC |
GenProp0868 | uncharacterized protein pair with twin-arg and repeat |
GenProp0894 | Actinobacterial uncharacterized trio |
GenProp0916 | radical SAM/uncharacterized protein TIGR03936 system |
GenProp0940 | metallo-mystery pair |
GenProp0959 | radical SAM/uncharacterized protein TIGR04002 system |
GenProp0965 | YedE/YedF selenium handling system |
GenProp1063 | Memo/AMMECR1/rSAM family trio system |
GenProp1066 | uncharacterized cassette GAK (Grasp, Amphipathic, Kinase) |
GenProp1086 | Firmicutes/Treponema mobile radical SAM system |
GenProp0140 | iron-sulfur cluster assembly systems |
GenProp0194 | siroheme biosynthesis from uroporphrinogen-III |
GenProp0222 | protoheme from protoporphyrin IX |
GenProp0770 | siderophore biosynthesis |
GenProp0774 | ferric citrate transport system |
GenProp0828 | heme uptake system, NEAT-domain mediated |
GenProp0961 | heme metabolism pair HutWX |